STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiD2N-acetylmuramoyl-L-alanine amidase; COG: COG5632; Pfam: PF01510,PF07833; InterPro: IPR002502. (243 aa)    
Predicted Functional Partners:
EFM25952.1
Cpl-7 lysozyme C-terminal domain protein; Pfam: PF01510,PF08230; InterPro: IPR013168.
  
 0.798
EFM24752.1
Hypothetical protein.
       0.778
EFM24753.1
Hypothetical protein.
       0.778
EFM25030.1
Hypothetical protein; Pfam: PF07554,PF05031,PF00395; InterPro: IPR001119.
  
  
  0.742
EFM24770.1
NlpC/P60 family protein; Pfam: PF00877; InterPro: IPR000064.
 
 
 0.736
EFM24755.1
Hypothetical protein; 6.4.1.2.
       0.709
EFM24815.1
Copper amine oxidase domain protein; Pfam: PF07833; InterPro: IPR012854.
  
  
  0.655
EFM24977.1
Peptidase, M56 family; Pfam: PF05569,PF01105; InterPro: IPR008756.
  
 
  0.609
EFM26277.1
Hypothetical protein.
 
  
  0.606
EFM24576.1
Thrombospondin type 3 repeat protein; Pfam: PF02412.
  
 
  0.581
Your Current Organism:
Peptoniphilus duerdenii
NCBI taxonomy Id: 862517
Other names: P. duerdenii ATCC BAA-1640, Peptoniphilus duerdenii ATCC BAA-1640, Peptoniphilus duerdenii WAL 18896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.