STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG11382Ribosomal protein L19. (246 aa)    
Predicted Functional Partners:
E6O75_ATG10330
Ribosomal protein L32.
  
 
 0.999
E6O75_ATG10229
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
E6O75_ATG07189
Ribosomal protein S2.
  
 
 0.999
E6O75_ATG08989
AP-2 complex subunit mu.
   
 
 0.999
E6O75_ATG07904
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
E6O75_ATG10365
GTP-binding protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.999
E6O75_ATG09880
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
E6O75_ATG07240
40S ribosomal protein S20.
   
 
 0.999
E6O75_ATG04903
60S ribosomal protein.
   
 
 0.999
E6O75_ATG11309
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.