STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG07281Ubiquitin thioesterase OTU1. (361 aa)    
Predicted Functional Partners:
E6O75_ATG06246
AAA ATPase; Belongs to the AAA ATPase family.
   
 0.990
E6O75_ATG10000
PFU-domain-containing protein.
    
 
 0.978
E6O75_ATG09031
UFD1-domain-containing protein.
   
 
 0.978
E6O75_ATG01979
Putative squalene synthase.
   
 
 0.975
E6O75_ATG11522
Putative nuclear protein localization protein 4 protein.
    
 
 0.973
E6O75_ATG08397
Gb.
    
 
 0.969
E6O75_ATG07999
Ubiquitin conjugation factor E4.
    
 
 0.965
E6O75_ATG04602
AAA-domain-containing protein.
   
 0.961
E6O75_ATG04480
Ubiquitin-dependent protein catabolic process.
   
 
 0.920
E6O75_ATG07669
Glyceraldehyde-3-phosphate dehydrogenase.
    
   0.879
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.