STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG07913Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (372 aa)    
Predicted Functional Partners:
E6O75_ATG05826
Porphobilinogen deaminase.
 
 0.993
E6O75_ATG09572
Uroporphyrin-III C-methyltransferas-like protein; Belongs to the precorrin methyltransferase family.
  
 
 0.938
E6O75_ATG06851
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
    
 0.907
E6O75_ATG05394
Hercynylcysteine sulfoxide lyase.
    
 0.878
E6O75_ATG11711
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.811
E6O75_ATG08798
tRNA pseudouridine synthase 1.
    
  0.785
E6O75_ATG03059
Mating factor A secretion protein STE6-like protein.
    
  0.785
E6O75_ATG10969
Acyl carrier protein.
    
 0.781
E6O75_ATG09271
PLP-dependent transferase.
    
 0.753
E6O75_ATG06140
Serine palmitoyltransferase.
    
 0.753
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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