STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG08634Glycoside hydrolase family 13 protein. (729 aa)    
Predicted Functional Partners:
E6O75_ATG01140
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.976
E6O75_ATG01681
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.970
E6O75_ATG02288
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.962
E6O75_ATG04019
Gb; Belongs to the phosphohexose mutase family.
  
 
 0.947
E6O75_ATG00269
Glycogen debranching enzyme.
  
 
 0.902
E6O75_ATG05624
Trehalase.
  
 
 0.838
E6O75_ATG01617
Glycosyltransferase family 4 protein.
   
 0.837
E6O75_ATG08909
Glycosyltransferase family 4 protein.
   
 0.837
E6O75_ATG11183
Uncharacterized protein.
   
 0.837
E6O75_ATG10668
Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit.
   
 0.837
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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