STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG11686Alpha/beta knot. (645 aa)    
Predicted Functional Partners:
E6O75_ATG03393
MRP-L47-domain-containing protein.
   
 
 0.908
E6O75_ATG07904
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.887
E6O75_ATG07771
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.885
E6O75_ATG10969
Acyl carrier protein.
    
 
 0.874
E6O75_ATG04671
Gb.
  
   0.874
E6O75_ATG05912
Ribosomal protein/NADH dehydrogenase domain protein.
    
   0.870
E6O75_ATG08615
EngB-type G domain-containing protein.
   
 
 0.860
E6O75_ATG10504
tRNA pseudouridine synthase D.
   
   0.853
E6O75_ATG01660
50S ribosomal protein L3.
   
 
 0.816
E6O75_ATG09899
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.816
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.