STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG09005ATP-dependent RNA helicase sub2. (438 aa)    
Predicted Functional Partners:
E6O75_ATG05102
Putative rna recognition motif containing protein.
   
 0.993
E6O75_ATG03663
Ribosomal protein L22.
    
 0.965
E6O75_ATG00737
ATP dependent RNA helicase.
    
 0.965
E6O75_ATG02155
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
  
0.963
E6O75_ATG09162
Gb.
   
 0.954
E6O75_ATG00263
DNA replication licensing factor.
   
 0.952
E6O75_ATG04521
NAD/NADP-dependent betaine aldehyde dehydrogenase.
   
 0.945
E6O75_ATG10977
Uncharacterized protein.
   
 0.940
E6O75_ATG06331
Uncharacterized protein.
   
 0.939
E6O75_ATG00999
SAP domain-containing protein.
   
 0.939
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.