STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG08253RNA-dependent RNA polymerase 1. (818 aa)    
Predicted Functional Partners:
E6O75_ATG09672
Nuclear transcription factor Y subunit B-10.
   
 0.998
E6O75_ATG06709
Histone-fold-containing protein.
    
 0.998
E6O75_ATG00571
Eukaryotic translation initiation factor 2 subunit gamma.
    
 0.972
E6O75_ATG01924
Sequence-specific DNA binding.
    
 
 0.881
E6O75_ATG04038
TATA-box binding protein.
    
 0.862
E6O75_ATG10284
BTB domain-containing protein.
    
 0.761
E6O75_ATG09910
Uncharacterized protein.
    
 
 0.586
E6O75_ATG06598
Uncharacterized protein.
    
 
 0.586
E6O75_ATG01554
Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.586
E6O75_ATG03642
Uncharacterized protein.
    
 
 0.565
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.