STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG06267SET domain-containing protein. (349 aa)    
Predicted Functional Partners:
E6O75_ATG03346
Uncharacterized protein.
   
 0.715
E6O75_ATG03758
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.692
E6O75_ATG01820
Uncharacterized protein.
    
 0.682
E6O75_ATG07519
Jumonji family transcription factor.
   
 0.677
E6O75_ATG02320
WD40 repeat-like protein.
    
 0.675
E6O75_ATG01046
WD40 repeat-like protein.
    
 0.652
E6O75_ATG06277
Ash2-trithorax family protein.
    
 0.651
E6O75_ATG07101
Histone H2A; Belongs to the histone H2A family.
    
 0.637
E6O75_ATG07205
Histone H2B; Belongs to the histone H2B family.
    
 0.631
E6O75_ATG04156
PHD-type domain-containing protein.
    
 0.561
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.