STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG07521ARM repeat-containing protein. (1021 aa)    
Predicted Functional Partners:
E6O75_ATG07013
Putative ccr4-not transcription complex subunit 7 protein.
    
 
 0.751
E6O75_ATG04660
ARM repeat-containing protein.
    
 
 0.660
E6O75_ATG09444
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
    
 
 0.651
E6O75_ATG05200
Pre-mRNA-splicing factor CLF1.
    
  0.646
E6O75_ATG04354
Pre-mRNA splicing factor slt-11.
     
 0.633
E6O75_ATG09373
Endo/exonuclease/phosphatase domain-containing protein.
    
 
 0.631
E6O75_ATG02813
Transcriptional regulator cwf13.
    
  0.628
E6O75_ATG07967
Uncharacterized protein.
    
  0.619
E6O75_ATG00155
Rhamnogalacturonate lyase.
    
  0.619
E6O75_ATG05099
Ammonium transporter 1.
   
   0.582
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.