E6O75_ATG06670 protein (Venturia nashicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E6O75_ATG06670

DJ-1 protein. (201 aa)

Predicted Functional Partners:

E6O75_ATG02737

0.863

E6O75_ATG05282

0.830

E6O75_ATG08428

0.775

E6O75_ATG04853

0.775

E6O75_ATG06152

0.775

E6O75_ATG05797

0.745

E6O75_ATG08397

0.713

E6O75_ATG01698

0.703

E6O75_ATG03238

0.683

E6O75_ATG05067

0.682

Your Current Organism:

Venturia nashicola

NCBI taxonomy Id: 86259
Other names: V. nashicola

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E6O75_ATG01698	E6O75_ATG05067	A0A4Z1NS10	A0A4Z1NZY0	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	BZIP domain-containing protein.	0.764
E6O75_ATG01698	E6O75_ATG06670	A0A4Z1NS10	A0A4Z1NW57	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	DJ-1 protein.	0.703
E6O75_ATG01698	E6O75_ATG08397	A0A4Z1NS10	A0A4Z1NM14	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Gb.	0.875
E6O75_ATG02737	E6O75_ATG03238	A0A4Z1PNY9	A0A4Z1PM70	Tryptophan synthase.	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	0.442
E6O75_ATG02737	E6O75_ATG05797	A0A4Z1PNY9	A0A4Z1PGE3	Tryptophan synthase.	Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.	0.865
E6O75_ATG02737	E6O75_ATG06670	A0A4Z1PNY9	A0A4Z1NW57	Tryptophan synthase.	DJ-1 protein.	0.863
E6O75_ATG03238	E6O75_ATG02737	A0A4Z1PM70	A0A4Z1PNY9	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	Tryptophan synthase.	0.442
E6O75_ATG03238	E6O75_ATG05067	A0A4Z1PM70	A0A4Z1NZY0	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	BZIP domain-containing protein.	0.576
E6O75_ATG03238	E6O75_ATG05282	A0A4Z1PM70	A0A4Z1NZV9	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	0.512
E6O75_ATG03238	E6O75_ATG06670	A0A4Z1PM70	A0A4Z1NW57	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	DJ-1 protein.	0.683
E6O75_ATG03238	E6O75_ATG08397	A0A4Z1PM70	A0A4Z1NM14	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	Gb.	0.576
E6O75_ATG04853	E6O75_ATG06670	A0A4Z1NYV4	A0A4Z1NW57	Cu/Zn superoxide dismutase-like protein.	DJ-1 protein.	0.775
E6O75_ATG05067	E6O75_ATG01698	A0A4Z1NZY0	A0A4Z1NS10	BZIP domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.764
E6O75_ATG05067	E6O75_ATG03238	A0A4Z1NZY0	A0A4Z1PM70	BZIP domain-containing protein.	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	0.576
E6O75_ATG05067	E6O75_ATG06670	A0A4Z1NZY0	A0A4Z1NW57	BZIP domain-containing protein.	DJ-1 protein.	0.682
E6O75_ATG05067	E6O75_ATG08397	A0A4Z1NZY0	A0A4Z1NM14	BZIP domain-containing protein.	Gb.	0.950
E6O75_ATG05282	E6O75_ATG03238	A0A4Z1NZV9	A0A4Z1PM70	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	Mitochondrial heat shock protein-like protein; Belongs to the heat shock protein 70 family.	0.512
E6O75_ATG05282	E6O75_ATG06670	A0A4Z1NZV9	A0A4Z1NW57	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	DJ-1 protein.	0.830
E6O75_ATG05797	E6O75_ATG02737	A0A4Z1PGE3	A0A4Z1PNY9	Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.	Tryptophan synthase.	0.865
E6O75_ATG05797	E6O75_ATG06670	A0A4Z1PGE3	A0A4Z1NW57	Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.	DJ-1 protein.	0.745