STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG05839TIP120-domain-containing protein. (1311 aa)    
Predicted Functional Partners:
E6O75_ATG06114
Ubiquitin ligase subunit; Belongs to the cullin family.
  
 0.980
E6O75_ATG09233
Gb.
    
 0.978
E6O75_ATG00882
Cullin-domain-containing protein; Belongs to the cullin family.
   
 0.972
E6O75_ATG10947
Cullin-domain-containing protein; Belongs to the cullin family.
   
 0.968
E6O75_ATG06186
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.853
E6O75_ATG03903
DNA damage-binding protein 1.
   
 0.845
E6O75_ATG10981
Gb.
    
 0.839
E6O75_ATG05246
POZ domain-containing protein; Belongs to the SKP1 family.
     
 0.823
E6O75_ATG06874
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.811
E6O75_ATG02593
Uncharacterized protein.
    
 0.811
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
Server load: low (24%) [HD]