STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG09803Glycoside hydrolase family 38 protein. (1092 aa)    
Predicted Functional Partners:
E6O75_ATG04802
Zinc finger RING-type protein.
     
 0.879
E6O75_ATG11534
Uncharacterized protein.
   
 
 0.775
E6O75_ATG07628
Glycoside hydrolase family 85 protein.
  
  
 0.682
E6O75_ATG02433
Six-hairpin glycosidase.
   
  
 0.626
E6O75_ATG01930
Vacuolar aminopeptidase 1; Belongs to the peptidase M18 family.
   
 
 0.618
E6O75_ATG05549
Peptidase M18; Belongs to the peptidase M18 family.
   
 
 0.597
E6O75_ATG10093
SH3 domain-containing protein.
   
  
 0.531
E6O75_ATG07355
Glucosidase I.
   
  
 0.531
E6O75_ATG02321
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
   0.526
E6O75_ATG00399
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.508
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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