Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COQ6 | E6O75_ATG05593 | A0A4Z1P462 | A0A4Z1P0T2 | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. | FAD/NAD(P)-binding domain-containing protein. | 0.427 |
E6O75_ATG05593 | COQ6 | A0A4Z1P0T2 | A0A4Z1P462 | FAD/NAD(P)-binding domain-containing protein. | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. | 0.427 |
E6O75_ATG05593 | E6O75_ATG05860 | A0A4Z1P0T2 | A0A4Z1P924 | FAD/NAD(P)-binding domain-containing protein. | Epoxide hydrolase. | 0.419 |
E6O75_ATG05593 | E6O75_ATG08421 | A0A4Z1P0T2 | A0A4Z1P3E7 | FAD/NAD(P)-binding domain-containing protein. | Alpha/Beta hydrolase protein. | 0.419 |
E6O75_ATG05860 | E6O75_ATG05593 | A0A4Z1P924 | A0A4Z1P0T2 | Epoxide hydrolase. | FAD/NAD(P)-binding domain-containing protein. | 0.419 |
E6O75_ATG05860 | E6O75_ATG08421 | A0A4Z1P924 | A0A4Z1P3E7 | Epoxide hydrolase. | Alpha/Beta hydrolase protein. | 0.871 |
E6O75_ATG08421 | E6O75_ATG05593 | A0A4Z1P3E7 | A0A4Z1P0T2 | Alpha/Beta hydrolase protein. | FAD/NAD(P)-binding domain-containing protein. | 0.419 |
E6O75_ATG08421 | E6O75_ATG05860 | A0A4Z1P3E7 | A0A4Z1P924 | Alpha/Beta hydrolase protein. | Epoxide hydrolase. | 0.871 |