E6O75_ATG01971 protein (Venturia nashicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E6O75_ATG01971

GPI anchored protein. (202 aa)

Predicted Functional Partners:

E6O75_ATG09106

0.941

E6O75_ATG05716

0.737

E6O75_ATG06177

0.684

E6O75_ATG08397

0.551

E6O75_ATG11674

0.543

E6O75_ATG09887

0.543

E6O75_ATG07540

0.543

E6O75_ATG10308

0.538

E6O75_ATG10957

0.538

E6O75_ATG08403

0.538

Your Current Organism:

Venturia nashicola

NCBI taxonomy Id: 86259
Other names: V. nashicola

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E6O75_ATG01971	E6O75_ATG05716	A0A4Z1P299	A0A4Z1P8T7	GPI anchored protein.	Uncharacterized protein.	0.737
E6O75_ATG01971	E6O75_ATG06177	A0A4Z1P299	A0A4Z1NTH5	GPI anchored protein.	Vegetative incompatibility protein het-e-1.	0.684
E6O75_ATG01971	E6O75_ATG07540	A0A4Z1P299	A0A4Z1P6F8	GPI anchored protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.543
E6O75_ATG01971	E6O75_ATG08397	A0A4Z1P299	A0A4Z1NM14	GPI anchored protein.	Gb.	0.551
E6O75_ATG01971	E6O75_ATG08403	A0A4Z1P299	A0A4Z1P4K7	GPI anchored protein.	Globin-like protein; Belongs to the globin family.	0.538
E6O75_ATG01971	E6O75_ATG09106	A0A4Z1P299	A0A4Z1P336	GPI anchored protein.	Uncharacterized protein.	0.941
E6O75_ATG01971	E6O75_ATG09887	A0A4Z1P299	A0A4Z1NR24	GPI anchored protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.543
E6O75_ATG01971	E6O75_ATG10308	A0A4Z1P299	A0A4Z1NFN0	GPI anchored protein.	Gb.	0.538
E6O75_ATG01971	E6O75_ATG10957	A0A4Z1P299	A0A4Z1P0R4	GPI anchored protein.	RuvB-like helicase 1.	0.538
E6O75_ATG01971	E6O75_ATG11674	A0A4Z1P299	A0A4Z1NL65	GPI anchored protein.	KEX1 protease; Belongs to the peptidase S8 family.	0.543
E6O75_ATG05716	E6O75_ATG01971	A0A4Z1P8T7	A0A4Z1P299	Uncharacterized protein.	GPI anchored protein.	0.737
E6O75_ATG05716	E6O75_ATG06177	A0A4Z1P8T7	A0A4Z1NTH5	Uncharacterized protein.	Vegetative incompatibility protein het-e-1.	0.938
E6O75_ATG05716	E6O75_ATG07540	A0A4Z1P8T7	A0A4Z1P6F8	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.446
E6O75_ATG05716	E6O75_ATG08397	A0A4Z1P8T7	A0A4Z1NM14	Uncharacterized protein.	Gb.	0.431
E6O75_ATG05716	E6O75_ATG09106	A0A4Z1P8T7	A0A4Z1P336	Uncharacterized protein.	Uncharacterized protein.	0.727
E6O75_ATG05716	E6O75_ATG09887	A0A4Z1P8T7	A0A4Z1NR24	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.446
E6O75_ATG06177	E6O75_ATG01971	A0A4Z1NTH5	A0A4Z1P299	Vegetative incompatibility protein het-e-1.	GPI anchored protein.	0.684
E6O75_ATG06177	E6O75_ATG05716	A0A4Z1NTH5	A0A4Z1P8T7	Vegetative incompatibility protein het-e-1.	Uncharacterized protein.	0.938
E6O75_ATG06177	E6O75_ATG07540	A0A4Z1NTH5	A0A4Z1P6F8	Vegetative incompatibility protein het-e-1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.942
E6O75_ATG06177	E6O75_ATG08397	A0A4Z1NTH5	A0A4Z1NM14	Vegetative incompatibility protein het-e-1.	Gb.	0.995