STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG10669P-loop containing nucleoside triphosphate hydrolase protein. (840 aa)    
Predicted Functional Partners:
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.910
E6O75_ATG04899
Sas10 domain-containing protein.
   
  0.908
E6O75_ATG08688
Utp14-domain-containing protein.
   
 0.898
E6O75_ATG01238
ATP-dependent RNA helicase rok1.
  
0.898
E6O75_ATG01136
Putative multiple rna-binding domain containing protein 1.
   
   0.892
E6O75_ATG05921
Nucleolar 27S pre-rRNA processing Urb2/Npa2.
   
 
 0.880
E6O75_ATG09310
U3 small nucleolar RNA-associated protein 22.
   
  0.877
E6O75_ATG10590
U3 small nucleolar RNA-associated protein 10.
   
  0.868
E6O75_ATG07838
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 
 0.861
E6O75_ATG09500
Rsa3 domain-containing protein.
   
 
 0.856
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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