E6O75_ATG02189 protein (Venturia nashicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E6O75_ATG02189

NAD(P)-binding protein. (299 aa)

Predicted Functional Partners:

E6O75_ATG03245

0.686

E6O75_ATG08393

0.604

E6O75_ATG08317

0.604

E6O75_ATG08829

0.575

E6O75_ATG02332

0.563

E6O75_ATG09797

0.562

E6O75_ATG06177

0.516

E6O75_ATG07747

0.465

E6O75_ATG10037

0.443

E6O75_ATG09276

0.443

Your Current Organism:

Venturia nashicola

NCBI taxonomy Id: 86259
Other names: V. nashicola

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E6O75_ATG02189	E6O75_ATG02332	A0A4Z1P4W5	A0A4Z1P6A4	NAD(P)-binding protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.563
E6O75_ATG02189	E6O75_ATG03245	A0A4Z1P4W5	A0A4Z1P9J4	NAD(P)-binding protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.686
E6O75_ATG02189	E6O75_ATG06177	A0A4Z1P4W5	A0A4Z1NTH5	NAD(P)-binding protein.	Vegetative incompatibility protein het-e-1.	0.516
E6O75_ATG02189	E6O75_ATG07747	A0A4Z1P4W5	A0A4Z1NW65	NAD(P)-binding protein.	Acyl CoA binding protein-domain-containing protein.	0.465
E6O75_ATG02189	E6O75_ATG08317	A0A4Z1P4W5	A0A4Z1P8L2	NAD(P)-binding protein.	Dihydrofolate reductase.	0.604
E6O75_ATG02189	E6O75_ATG08393	A0A4Z1P4W5	A0A4Z1P4J9	NAD(P)-binding protein.	Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.	0.604
E6O75_ATG02189	E6O75_ATG08829	A0A4Z1P4W5	A0A4Z1NGX6	NAD(P)-binding protein.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.575
E6O75_ATG02189	E6O75_ATG09276	A0A4Z1P4W5	A0A4Z1NFF8	NAD(P)-binding protein.	Carrier domain-containing protein.	0.443
E6O75_ATG02189	E6O75_ATG09797	A0A4Z1P4W5	A0A4Z1NQT1	NAD(P)-binding protein.	Lactamase_B domain-containing protein.	0.562
E6O75_ATG02189	E6O75_ATG10037	A0A4Z1P4W5	A0A4Z1NFC5	NAD(P)-binding protein.	Uncharacterized protein.	0.443
E6O75_ATG02332	E6O75_ATG02189	A0A4Z1P6A4	A0A4Z1P4W5	2Fe-2S ferredoxin-type domain-containing protein.	NAD(P)-binding protein.	0.563
E6O75_ATG02332	E6O75_ATG03245	A0A4Z1P6A4	A0A4Z1P9J4	2Fe-2S ferredoxin-type domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.820
E6O75_ATG02332	E6O75_ATG07747	A0A4Z1P6A4	A0A4Z1NW65	2Fe-2S ferredoxin-type domain-containing protein.	Acyl CoA binding protein-domain-containing protein.	0.507
E6O75_ATG03245	E6O75_ATG02189	A0A4Z1P9J4	A0A4Z1P4W5	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	NAD(P)-binding protein.	0.686
E6O75_ATG03245	E6O75_ATG02332	A0A4Z1P9J4	A0A4Z1P6A4	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	2Fe-2S ferredoxin-type domain-containing protein.	0.820
E6O75_ATG03245	E6O75_ATG06177	A0A4Z1P9J4	A0A4Z1NTH5	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Vegetative incompatibility protein het-e-1.	0.408
E6O75_ATG03245	E6O75_ATG07747	A0A4Z1P9J4	A0A4Z1NW65	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Acyl CoA binding protein-domain-containing protein.	0.577
E6O75_ATG03245	E6O75_ATG08829	A0A4Z1P9J4	A0A4Z1NGX6	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.540
E6O75_ATG03245	E6O75_ATG09276	A0A4Z1P9J4	A0A4Z1NFF8	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Carrier domain-containing protein.	0.536
E6O75_ATG03245	E6O75_ATG09797	A0A4Z1P9J4	A0A4Z1NQT1	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Lactamase_B domain-containing protein.	0.820