STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG09902FAD/NAD(P)-binding domain-containing protein. (579 aa)    
Predicted Functional Partners:
E6O75_ATG03328
Gamma hydroxybutyrate dehydrogenase.
    
 
 0.895
E6O75_ATG02737
Tryptophan synthase.
     
 0.852
E6O75_ATG03758
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.801
E6O75_ATG11685
Putative glucose transporter rco-3.
    
 0.785
E6O75_ATG07205
Histone H2B; Belongs to the histone H2B family.
    
 0.784
E6O75_ATG08932
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.783
E6O75_ATG06706
Histone deacetylase RPD3.
    
 0.783
E6O75_ATG02320
WD40 repeat-like protein.
    
 0.769
E6O75_ATG07519
Jumonji family transcription factor.
   
 0.758
E6O75_ATG01990
Farnesyl-diphosphate farnesyl transferas-like protein.
   
 
 0.717
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.