STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG02954Dynein light intermediate chain. (504 aa)    
Predicted Functional Partners:
E6O75_ATG11470
WD40 repeat-like protein.
   
 0.984
E6O75_ATG03583
Cytoplasmic dynein-like protein 1 heavy chain 1.
    
 0.974
E6O75_ATG02380
Dynein-associated polypeptide ro-3.
   
 0.973
E6O75_ATG06740
Gb.
    
 0.958
E6O75_ATG01766
Uncharacterized protein.
    
 0.954
E6O75_ATG09689
Putative dynactin subunit 2 protein.
   
 0.952
E6O75_ATG11678
Putative f-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.934
E6O75_ATG05985
Ras-like protein Rab7.
   
 0.929
E6O75_ATG08510
Trimeric LpxA-like protein.
    
 0.917
E6O75_ATG01137
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
    
 0.906
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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