STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG09160Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
E6O75_ATG03245
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.535
E6O75_ATG04156
PHD-type domain-containing protein.
    
  0.478
E6O75_ATG01258
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.463
E6O75_ATG03557
Uncharacterized protein.
    
  0.463
E6O75_ATG02713
V-type proton ATPase subunit B.
    
  0.423
E6O75_ATG05006
Putative mitochondrial 2-oxoglutarate/malate carrier protein.
     
 0.420
E6O75_ATG01340
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.420
E6O75_ATG00434
DNA-directed RNA polymerase Rpb11 13-16kDa subunit conserved site.
    
  0.407
E6O75_ATG08667
DNA-directed RNA polymeras-like protein II subunit RPB9.
    
  0.400
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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