STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG02640Bromodomain-containing protein. (948 aa)    
Predicted Functional Partners:
E6O75_ATG03758
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.941
E6O75_ATG08259
TAFII55 protein conserved region.
    
 
 0.925
E6O75_ATG01771
SANT_DAMP1_like domain-containing protein.
    
 
 0.860
E6O75_ATG01169
SNF2-related protein.
   
 
 0.844
E6O75_ATG09924
F-box and JmjC domain-containing protein.
    
 
 0.836
E6O75_ATG07336
DUF3591 domain-containing protein.
    
 
 0.827
E6O75_ATG09758
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
 
 0.790
E6O75_ATG07101
Histone H2A; Belongs to the histone H2A family.
    
 
 0.775
E6O75_ATG08987
Histone H3.
    
 
 0.758
E6O75_ATG04443
Gb.
    
 
 0.758
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.