STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG05355Putative tbc domain protein. (499 aa)    
Predicted Functional Partners:
E6O75_ATG07418
GTP-binding protein ypt1.
    
 0.997
E6O75_ATG07700
Ras-domain-containing protein.
    
 0.637
E6O75_ATG02601
Rab-GAP TBC domain-containing protein.
    
 
 0.504
E6O75_ATG03217
GTPase-activating protein-like protein GYP2.
      
 0.499
E6O75_ATG07433
GTP-binding protein ypt1.
      
 0.497
E6O75_ATG04796
Iron hydrogenase; Belongs to the NARF family.
   
  
 0.478
E6O75_ATG02615
Gtpase activating protein.
      
 0.459
E6O75_ATG02306
TPR-like protein.
      
 0.443
E6O75_ATG07198
SAICAR synthase-like protein.
    
 
 0.429
E6O75_ATG03573
Gb.
    
 
 0.404
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.