STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG02613Putative serine/threonine-protein kinase. (450 aa)    
Predicted Functional Partners:
E6O75_ATG04200
Pre-mrna splicing factor.
    
 0.787
E6O75_ATG04675
Pre-mRNA splicing factor cef-1.
    
   0.674
E6O75_ATG08222
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.587
E6O75_ATG06995
RRM domain-containing protein.
    
 0.569
E6O75_ATG11079
Pre-mrna splicing factor.
    
 0.561
E6O75_ATG10635
Putative rna splicing factor protein.
    
 
 0.471
E6O75_ATG05911
U1 small nuclear ribonucleoprotein 70 kDa.
    
 0.471
E6O75_ATG06818
Uncharacterized protein.
    
 0.437
E6O75_ATG08548
RING-type domain-containing protein.
    
 
 0.434
E6O75_ATG10747
Kinase-like protein.
    
 
0.420
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.