STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG02180Ribosomal protein L1. (314 aa)    
Predicted Functional Partners:
E6O75_ATG07087
Putative 50s ribosomal subunit l7 protein.
  
 
   0.682
E6O75_ATG10776
Gb; Belongs to the universal ribosomal protein uL11 family.
   
   0.636
E6O75_ATG05151
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
   0.628
E6O75_ATG00461
Manganese and iron superoxide dismutase.
   
   0.623
E6O75_ATG11382
Ribosomal protein L19.
    
   0.619
E6O75_ATG08689
Uncharacterized protein.
    
   0.619
E6O75_ATG07189
Ribosomal protein S2.
    
   0.619
E6O75_ATG01630
KOW motif domain-containing protein.
    
   0.619
E6O75_ATG01660
50S ribosomal protein L3.
    
   0.619
E6O75_ATG07272
Translation initiation factor.
    
   0.619
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.