STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG00080Succinate dehydrogenase flavoprotein subunit. (389 aa)    
Predicted Functional Partners:
E6O75_ATG00288
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
 
 0.994
E6O75_ATG01193
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
   
 0.987
E6O75_ATG02260
Succinate dehydrogenase (Ubiquinone) cytochrome b560 subunit.
  
 0.987
E6O75_ATG00081
Putative succinate dehydrogenase [ubiquinone] flavoprotein subunit.
 
     0.951
E6O75_ATG11437
Putative NADH-ubiquinone oxidoreductase 49 kDa subunit; Belongs to the complex I 49 kDa subunit family.
  
 0.923
E6O75_ATG08880
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 0.922
E6O75_ATG10968
Putative nadh-ubiquinone oxidoreductase 23 kDa subunit protein.
  
 0.919
E6O75_ATG11497
Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.
  
 0.914
E6O75_ATG06958
Pre-mRNA-splicing factor.
 
 0.902
E6O75_ATG07567
NADH-quinone oxidoreductase; Belongs to the complex I 75 kDa subunit family.
  
 0.898
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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