Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E6O75_ATG00394 | E6O75_ATG00886 | A0A4Z1PIA4 | A0A4Z1PCW5 | Ribosomal protein L1. | DUF663-domain-containing protein. | 0.980 |
E6O75_ATG00394 | E6O75_ATG01783 | A0A4Z1PIA4 | A0A4Z1NT62 | Ribosomal protein L1. | Ribosomal biogenesis protein Gar2. | 0.999 |
E6O75_ATG00394 | E6O75_ATG03324 | A0A4Z1PIA4 | A0A4Z1P7E9 | Ribosomal protein L1. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.985 |
E6O75_ATG00394 | E6O75_ATG04911 | A0A4Z1PIA4 | A0A4Z1P9Y3 | Ribosomal protein L1. | Nucleolar GTP-binding protein 2. | 0.994 |
E6O75_ATG00394 | E6O75_ATG05263 | A0A4Z1PIA4 | A0A4Z1P2G0 | Ribosomal protein L1. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.991 |
E6O75_ATG00394 | E6O75_ATG05637 | A0A4Z1PIA4 | A0A4Z1PFY9 | Ribosomal protein L1. | RNA helicase. | 0.998 |
E6O75_ATG00394 | E6O75_ATG06925 | A0A4Z1PIA4 | A0A4Z1PAY6 | Ribosomal protein L1. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.995 |
E6O75_ATG00394 | ERB1 | A0A4Z1PIA4 | A0A4Z1P1P8 | Ribosomal protein L1. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
E6O75_ATG00394 | NOP7 | A0A4Z1PIA4 | A0A4Z1NFS8 | Ribosomal protein L1. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
E6O75_ATG00394 | YTM1 | A0A4Z1PIA4 | A0A4Z1PFL4 | Ribosomal protein L1. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.994 |
E6O75_ATG00886 | E6O75_ATG00394 | A0A4Z1PCW5 | A0A4Z1PIA4 | DUF663-domain-containing protein. | Ribosomal protein L1. | 0.980 |
E6O75_ATG00886 | E6O75_ATG01783 | A0A4Z1PCW5 | A0A4Z1NT62 | DUF663-domain-containing protein. | Ribosomal biogenesis protein Gar2. | 0.763 |
E6O75_ATG00886 | E6O75_ATG03324 | A0A4Z1PCW5 | A0A4Z1P7E9 | DUF663-domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
E6O75_ATG00886 | E6O75_ATG04911 | A0A4Z1PCW5 | A0A4Z1P9Y3 | DUF663-domain-containing protein. | Nucleolar GTP-binding protein 2. | 0.886 |
E6O75_ATG00886 | E6O75_ATG05263 | A0A4Z1PCW5 | A0A4Z1P2G0 | DUF663-domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.936 |
E6O75_ATG00886 | E6O75_ATG05637 | A0A4Z1PCW5 | A0A4Z1PFY9 | DUF663-domain-containing protein. | RNA helicase. | 0.994 |
E6O75_ATG00886 | E6O75_ATG06925 | A0A4Z1PCW5 | A0A4Z1PAY6 | DUF663-domain-containing protein. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.921 |
E6O75_ATG00886 | ERB1 | A0A4Z1PCW5 | A0A4Z1P1P8 | DUF663-domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.891 |
E6O75_ATG00886 | NOP7 | A0A4Z1PCW5 | A0A4Z1NFS8 | DUF663-domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.914 |
E6O75_ATG00886 | YTM1 | A0A4Z1PCW5 | A0A4Z1PFL4 | DUF663-domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.742 |
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