STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG02601Rab-GAP TBC domain-containing protein. (741 aa)    
Predicted Functional Partners:
E6O75_ATG01606
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.954
E6O75_ATG04078
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.884
E6O75_ATG04894
Vacuolar protein sorting-associated protein 26B-A.
   
 
 0.853
E6O75_ATG03573
Gb.
   
 
 0.702
E6O75_ATG08967
Uncharacterized protein.
      
 0.538
E6O75_ATG05355
Putative tbc domain protein.
    
 
 0.504
E6O75_ATG09589
Sorting nexin-3.
    
 
 0.502
E6O75_ATG07585
Ras-related protein rab-like protein-11B.
    
 
 0.497
E6O75_ATG10868
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.491
E6O75_ATG07433
GTP-binding protein ypt1.
      
 0.453
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.