E6O75_ATG02058 protein (Venturia nashicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E6O75_ATG02058

Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. (628 aa)

Predicted Functional Partners:

E6O75_ATG05006

0.770

E6O75_ATG01340

0.770

E6O75_ATG10256

0.653

E6O75_ATG10315

0.651

E6O75_ATG00419

0.645

E6O75_ATG05250

0.644

E6O75_ATG10969

0.601

E6O75_ATG11357

0.563

E6O75_ATG00144

0.563

E6O75_ATG08708

0.559

Your Current Organism:

Venturia nashicola

NCBI taxonomy Id: 86259
Other names: V. nashicola

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E6O75_ATG00144	E6O75_ATG02058	A0A4Z1PHQ8	A0A4Z1PLF9	Squalene-hopene cyclase.	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.563
E6O75_ATG00144	E6O75_ATG08708	A0A4Z1PHQ8	A0A4Z1P2K6	Squalene-hopene cyclase.	Squalene epoxidase.	0.933
E6O75_ATG00419	E6O75_ATG01340	A0A4Z1PWT8	A0A4Z1PU81	FAD-binding domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.572
E6O75_ATG00419	E6O75_ATG02058	A0A4Z1PWT8	A0A4Z1PLF9	FAD-binding domain-containing protein.	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.645
E6O75_ATG00419	E6O75_ATG05006	A0A4Z1PWT8	A0A4Z1P9K5	FAD-binding domain-containing protein.	Putative mitochondrial 2-oxoglutarate/malate carrier protein.	0.572
E6O75_ATG01340	E6O75_ATG00419	A0A4Z1PU81	A0A4Z1PWT8	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	FAD-binding domain-containing protein.	0.572
E6O75_ATG01340	E6O75_ATG02058	A0A4Z1PU81	A0A4Z1PLF9	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.770
E6O75_ATG01340	E6O75_ATG05006	A0A4Z1PU81	A0A4Z1P9K5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Putative mitochondrial 2-oxoglutarate/malate carrier protein.	0.962
E6O75_ATG01340	E6O75_ATG05250	A0A4Z1PU81	A0A4Z1PG22	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	6-hydroxy-d-nicotine oxidase.	0.572
E6O75_ATG01340	E6O75_ATG08708	A0A4Z1PU81	A0A4Z1P2K6	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Squalene epoxidase.	0.638
E6O75_ATG01340	E6O75_ATG10256	A0A4Z1PU81	A0A4Z1NCR4	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Oxidoreductase FAD-binding protein.	0.572
E6O75_ATG01340	E6O75_ATG10315	A0A4Z1PU81	A0A4Z1NZS4	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	FAD-binding domain-containing protein.	0.572
E6O75_ATG01340	E6O75_ATG10969	A0A4Z1PU81	A0A4Z1P2T6	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Acyl carrier protein.	0.540
E6O75_ATG02058	E6O75_ATG00144	A0A4Z1PLF9	A0A4Z1PHQ8	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Squalene-hopene cyclase.	0.563
E6O75_ATG02058	E6O75_ATG00419	A0A4Z1PLF9	A0A4Z1PWT8	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	FAD-binding domain-containing protein.	0.645
E6O75_ATG02058	E6O75_ATG01340	A0A4Z1PLF9	A0A4Z1PU81	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.770
E6O75_ATG02058	E6O75_ATG05006	A0A4Z1PLF9	A0A4Z1P9K5	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Putative mitochondrial 2-oxoglutarate/malate carrier protein.	0.770
E6O75_ATG02058	E6O75_ATG05250	A0A4Z1PLF9	A0A4Z1PG22	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	6-hydroxy-d-nicotine oxidase.	0.644
E6O75_ATG02058	E6O75_ATG08708	A0A4Z1PLF9	A0A4Z1P2K6	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Squalene epoxidase.	0.559
E6O75_ATG02058	E6O75_ATG10256	A0A4Z1PLF9	A0A4Z1NCR4	Low-affinity potassium transport protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Oxidoreductase FAD-binding protein.	0.653