E6O75_ATG00181 protein (Venturia nashicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E6O75_ATG00181

Dienelactone hydrolase family protein-like protein. (277 aa)

Predicted Functional Partners:

E6O75_ATG09541

0.483

E6O75_ATG05703

0.470

E6O75_ATG06888

0.467

E6O75_ATG06389

0.467

E6O75_ATG03253

0.467

E6O75_ATG01092

0.467

E6O75_ATG04529

0.457

E6O75_ATG11579

0.452

E6O75_ATG10882

0.436

E6O75_ATG08595

0.433

Your Current Organism:

Venturia nashicola

NCBI taxonomy Id: 86259
Other names: V. nashicola

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E6O75_ATG00181	E6O75_ATG01092	A0A4Z1PN16	A0A4Z1PUE0	Dienelactone hydrolase family protein-like protein.	Uncharacterized protein.	0.467
E6O75_ATG00181	E6O75_ATG03253	A0A4Z1PN16	A0A4Z1P485	Dienelactone hydrolase family protein-like protein.	Dehydroquinate synthase-like protein.	0.467
E6O75_ATG00181	E6O75_ATG04529	A0A4Z1PN16	A0A4Z1PRQ2	Dienelactone hydrolase family protein-like protein.	3-hydroxybutyryl-CoA dehydrogenase.	0.457
E6O75_ATG00181	E6O75_ATG05703	A0A4Z1PN16	A0A4Z1P135	Dienelactone hydrolase family protein-like protein.	Dehydroquinate synthase-like protein.	0.470
E6O75_ATG00181	E6O75_ATG06389	A0A4Z1PN16	A0A4Z1NXP0	Dienelactone hydrolase family protein-like protein.	Uncharacterized protein.	0.467
E6O75_ATG00181	E6O75_ATG06888	A0A4Z1PN16	A0A4Z1NTY5	Dienelactone hydrolase family protein-like protein.	Fe-containing alcohol dehydrogenase.	0.467
E6O75_ATG00181	E6O75_ATG08595	A0A4Z1PN16	A0A4Z1NVQ6	Dienelactone hydrolase family protein-like protein.	Cytosolic fructose-1-6-bisphosphatase; Belongs to the FBPase class 1 family.	0.433
E6O75_ATG00181	E6O75_ATG09541	A0A4Z1PN16	A0A4Z1NTR9	Dienelactone hydrolase family protein-like protein.	Dienelactone hydrolase family protein.	0.483
E6O75_ATG00181	E6O75_ATG10882	A0A4Z1PN16	A0A4Z1P3P8	Dienelactone hydrolase family protein-like protein.	3-hydroxyacyl-CoA dehydrogenase.	0.436
E6O75_ATG00181	E6O75_ATG11579	A0A4Z1PN16	A0A4Z1NQ88	Dienelactone hydrolase family protein-like protein.	Uncharacterized protein.	0.452
E6O75_ATG01092	E6O75_ATG00181	A0A4Z1PUE0	A0A4Z1PN16	Uncharacterized protein.	Dienelactone hydrolase family protein-like protein.	0.467
E6O75_ATG03253	E6O75_ATG00181	A0A4Z1P485	A0A4Z1PN16	Dehydroquinate synthase-like protein.	Dienelactone hydrolase family protein-like protein.	0.467
E6O75_ATG04529	E6O75_ATG00181	A0A4Z1PRQ2	A0A4Z1PN16	3-hydroxybutyryl-CoA dehydrogenase.	Dienelactone hydrolase family protein-like protein.	0.457
E6O75_ATG04529	E6O75_ATG10882	A0A4Z1PRQ2	A0A4Z1P3P8	3-hydroxybutyryl-CoA dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.824
E6O75_ATG05703	E6O75_ATG00181	A0A4Z1P135	A0A4Z1PN16	Dehydroquinate synthase-like protein.	Dienelactone hydrolase family protein-like protein.	0.470
E6O75_ATG06389	E6O75_ATG00181	A0A4Z1NXP0	A0A4Z1PN16	Uncharacterized protein.	Dienelactone hydrolase family protein-like protein.	0.467
E6O75_ATG06888	E6O75_ATG00181	A0A4Z1NTY5	A0A4Z1PN16	Fe-containing alcohol dehydrogenase.	Dienelactone hydrolase family protein-like protein.	0.467
E6O75_ATG08595	E6O75_ATG00181	A0A4Z1NVQ6	A0A4Z1PN16	Cytosolic fructose-1-6-bisphosphatase; Belongs to the FBPase class 1 family.	Dienelactone hydrolase family protein-like protein.	0.433
E6O75_ATG09541	E6O75_ATG00181	A0A4Z1NTR9	A0A4Z1PN16	Dienelactone hydrolase family protein.	Dienelactone hydrolase family protein-like protein.	0.483
E6O75_ATG10882	E6O75_ATG00181	A0A4Z1P3P8	A0A4Z1PN16	3-hydroxyacyl-CoA dehydrogenase.	Dienelactone hydrolase family protein-like protein.	0.436