STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG00625AAA-domain-containing protein. (733 aa)    
Predicted Functional Partners:
E6O75_ATG01702
Antiviral helicase.
   
 
 0.953
E6O75_ATG00380
RNA-binding domain-containing protein.
   
  
 0.923
E6O75_ATG03095
Putative glucan endo-1-3-beta-glucosidase.
   
 
 0.888
E6O75_ATG10984
Imidazole glycerol phosphate synthase.
   
    0.887
E6O75_ATG08602
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
  
 0.851
E6O75_ATG08250
Putative brix domain-containing protein.
   
 
 0.841
E6O75_ATG01979
Putative squalene synthase.
   
 0.841
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.836
E6O75_ATG11522
Putative nuclear protein localization protein 4 protein.
    
 0.829
E6O75_ATG11018
Alpha-soluble NSF attachment protein.
    
 0.818
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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