STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E6O75_ATG00177C6 finger domain-containing protein. (661 aa)    
Predicted Functional Partners:
E6O75_ATG11642
Ubiquitin-like protein.
    
 0.923
E6O75_ATG00757
Ubiquitin-like protein.
    
 0.923
E6O75_ATG03855
Cysteine proteinase.
    
 0.868
E6O75_ATG00768
Pre-rRNA-processing protein ipi1.
    
 0.761
E6O75_ATG06213
Las1-like protein.
   
 0.748
E6O75_ATG06214
Chitin synthase export chaperone.
   
 0.748
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
    
  0.696
E6O75_ATG07161
Pre-mRNA cleavage complex II Clp1.
    
 0.693
E6O75_ATG06086
Uncharacterized protein.
   
  0.682
E6O75_ATG06081
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.682
Your Current Organism:
Venturia nashicola
NCBI taxonomy Id: 86259
Other names: V. nashicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.