Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E6O75_ATG00477 | E6O75_ATG02800 | A0A4Z1PWA9 | A0A4Z1P844 | U6 snRNA-associated Sm-like protein LSm6. | L-threo-3-deoxy-hexylosonate aldolase. | 0.993 |
E6O75_ATG00477 | E6O75_ATG03714 | A0A4Z1PWA9 | A0A4Z1PJB7 | U6 snRNA-associated Sm-like protein LSm6. | Topoisomerase ii associated protein. | 0.999 |
E6O75_ATG00477 | E6O75_ATG06424 | A0A4Z1PWA9 | A0A4Z1PBJ1 | U6 snRNA-associated Sm-like protein LSm6. | Small nuclear ribonucleoprotein Sm D2. | 0.996 |
E6O75_ATG00477 | E6O75_ATG08105 | A0A4Z1PWA9 | A0A4Z1P5X4 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
E6O75_ATG00477 | E6O75_ATG10554 | A0A4Z1PWA9 | A0A4Z1P1G9 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm7. | 0.999 |
E6O75_ATG00477 | E6O75_ATG11619 | A0A4Z1PWA9 | A0A4Z1NQE0 | U6 snRNA-associated Sm-like protein LSm6. | Putative pre-mRNA splicing helicase. | 0.991 |
E6O75_ATG00477 | LSM3 | A0A4Z1PWA9 | A0A4Z1P2P5 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
E6O75_ATG00477 | LSM4 | A0A4Z1PWA9 | A0A4Z1PKG8 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
E6O75_ATG00477 | LSM5 | A0A4Z1PWA9 | A0A4Z1PXT7 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
E6O75_ATG00477 | LSM8 | A0A4Z1PWA9 | A0A4Z1PDL5 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
E6O75_ATG02800 | E6O75_ATG00477 | A0A4Z1P844 | A0A4Z1PWA9 | L-threo-3-deoxy-hexylosonate aldolase. | U6 snRNA-associated Sm-like protein LSm6. | 0.993 |
E6O75_ATG02800 | E6O75_ATG06424 | A0A4Z1P844 | A0A4Z1PBJ1 | L-threo-3-deoxy-hexylosonate aldolase. | Small nuclear ribonucleoprotein Sm D2. | 0.992 |
E6O75_ATG02800 | E6O75_ATG08105 | A0A4Z1P844 | A0A4Z1P5X4 | L-threo-3-deoxy-hexylosonate aldolase. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.993 |
E6O75_ATG02800 | E6O75_ATG10554 | A0A4Z1P844 | A0A4Z1P1G9 | L-threo-3-deoxy-hexylosonate aldolase. | U6 snRNA-associated Sm-like protein LSm7. | 0.994 |
E6O75_ATG02800 | E6O75_ATG11619 | A0A4Z1P844 | A0A4Z1NQE0 | L-threo-3-deoxy-hexylosonate aldolase. | Putative pre-mRNA splicing helicase. | 0.995 |
E6O75_ATG02800 | LSM3 | A0A4Z1P844 | A0A4Z1P2P5 | L-threo-3-deoxy-hexylosonate aldolase. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.993 |
E6O75_ATG02800 | LSM4 | A0A4Z1P844 | A0A4Z1PKG8 | L-threo-3-deoxy-hexylosonate aldolase. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.992 |
E6O75_ATG02800 | LSM5 | A0A4Z1P844 | A0A4Z1PXT7 | L-threo-3-deoxy-hexylosonate aldolase. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.994 |
E6O75_ATG02800 | LSM8 | A0A4Z1P844 | A0A4Z1PDL5 | L-threo-3-deoxy-hexylosonate aldolase. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.992 |
E6O75_ATG03714 | E6O75_ATG00477 | A0A4Z1PJB7 | A0A4Z1PWA9 | Topoisomerase ii associated protein. | U6 snRNA-associated Sm-like protein LSm6. | 0.999 |
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