STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZOLI_0006Exported protein of unknown function; No homology to any previously reported sequences. (214 aa)    
Predicted Functional Partners:
AZOLI_1199
Homologs of previously reported genes of unknown function.
  
     0.688
AZOLI_0246
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.674
AZOLI_0947
Homologs of previously reported genes of unknown function.
  
     0.645
AZOLI_0575
Protein of unknown function; No homology to any previously reported sequences.
  
   0.642
AZOLI_1832
Membrane protein of unknown function; No homology to any previously reported sequences.
 
     0.641
AZOLI_0728
Protein of unknown function; No homology to any previously reported sequences; Belongs to the 'phage' integrase family.
 
  
 0.613
AZOLI_1678
Homologs of previously reported genes of unknown function.
  
     0.561
AZOLI_0009
Homologs of previously reported genes of unknown function.
 
     0.522
AZOLI_1362
Protein of unknown function; No homology to any previously reported sequences.
  
     0.508
AZOLI_1688
Homologs of previously reported genes of unknown function.
  
     0.505
Your Current Organism:
Azospirillum lipoferum
NCBI taxonomy Id: 862719
Other names: A. lipoferum 4B, Azospirillum lipoferum 4B, Azospirillum lipoferum str. 4B, Azospirillum lipoferum strain 4B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.