STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZOLI_2667Homologs of previously reported genes of unknown function. (647 aa)    
Predicted Functional Partners:
AZOLI_0134
Homologs of previously reported genes of unknown function.
 
     0.764
trxB
Thioredoxin reductase, FAD/NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.612
AZOLI_0774
Homologs of previously reported genes of unknown function.
  
     0.594
AZOLI_0136
Homologs of previously reported genes of unknown function.
 
     0.582
AZOLI_0514
Homologs of previously reported genes of unknown function.
  
     0.557
AZOLI_2666
Putative transcriptional Regulator, PadR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.497
AZOLI_2600
Homologs of previously reported genes of unknown function.
  
     0.492
AZOLI_2665
Homologs of previously reported genes of unknown function.
       0.471
AZOLI_0269
Homologs of previously reported genes of unknown function.
  
     0.429
AZOLI_2440
Homologs of previously reported genes of unknown function.
  
     0.400
Your Current Organism:
Azospirillum lipoferum
NCBI taxonomy Id: 862719
Other names: A. lipoferum 4B, Azospirillum lipoferum 4B, Azospirillum lipoferum str. 4B, Azospirillum lipoferum strain 4B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.