STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN13180.1KEGG: sgr:SGR_6429 putative neuramidase. (482 aa)    
Predicted Functional Partners:
AEN13791.1
Alpha-galactosidase; KEGG: cai:Caci_5007 alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D.
     
  0.900
AEN13795.1
KEGG: sma:SAV_1641 alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D.
     
  0.900
AEN13188.1
PFAM: dihydrodipicolinate synthetase; KEGG: sgr:SGR_6422 putative dihydrodipicolinate synthase; Belongs to the DapA family.
   
 0.742
AEN13177.1
PFAM: dihydrodipicolinate synthetase; KEGG: sgr:SGR_6431 putative dihydrodipicolinate synthase; Belongs to the DapA family.
   
 0.667
AEN13183.1
GntR domain protein; KEGG: sgr:SGR_6427 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
     0.644
AEN13182.1
Cephalosporin-C deacetylase; KEGG: sgr:SGR_6428 putative acetyl xylan esterase; PFAM: Acetyl xylan esterase.
       0.643
AEN13181.1
PFAM: lipolytic protein G-D-S-L family; Laminin G sub domain 2; KEGG: rer:RER_09500 hypothetical protein.
     0.634
AEN13186.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sgr:SGR_6424 putative ABC transporter permease and ATPase component; SMART: AAA ATPase.
 
     0.608
AEN08310.1
Beta-galactosidase; KEGG: sma:SAV_1027 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein.
  
 0.602
AEN09212.1
Beta-galactosidase; KEGG: sma:SAV_1325 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein.
  
 0.602
Your Current Organism:
Streptomyces sp. SirexAAE
NCBI taxonomy Id: 862751
Other names: S. sp. SirexAA-E, Streptomyces sp. ACTE, Streptomyces sp. SA3_actE, Streptomyces sp. SirexAA-E
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