STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_0088Putative two-component sensor kinase; Possible downstream translational starts. (564 aa)    
Predicted Functional Partners:
BMS_1309
Putative two component system histidine kinase/response regulator fusion protein.
 
 
0.868
BMS_2446
Putative two-component response regulator.
 
 
 0.863
BMS_2347
Putative chemotaxis regulatory protein.
 
 
 0.856
BMS_0087
Putative two-component response regulator.
 
 
   0.842
BMS_2743
Two-component system response regulator.
 
 
 0.841
BMS_0431
Putative positive response regulator for pho regulon, sensor is PhoR (or CreC).
 
 
 0.840
BMS_0436
Putative two-component system, response regulator.
 
 
 
 0.829
BMS_2390
Two-component sensor kinase.
 
 
 
 0.807
BMS_3383
Putative alkaline phosphatase synthesis sensor protein.
 
 
 
 0.806
BMS_1769
Two-component response regulator.
  
   0.797
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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