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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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[Homology]
Score
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (256 aa)    
Predicted Functional Partners:
pssA
Putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.808
BMS_0237
Putative exported protein.
       0.783
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
    0.776
BMS_0239
Putative exported protein.
       0.773
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
 
    0.755
BMS_0236
Putative glycoprotein endopeptidase.
     
 0.718
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
  
 0.708
rseP
Putative transmembane regulator of protease.
       0.692
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
 
 0.687
rplQ
50S ribosomal protein L17.
  
  
 0.670
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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