STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_0478Possible phosphatidate cytidylyltransferase. (319 aa)    
Predicted Functional Partners:
BMS_0479
Putative acyltransferase.
 
 
  0.990
BMS_0477
Putative membrane protein.
 
  
 0.981
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
  
 
0.925
pssA
Putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.911
BMS_1700
Putative acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
 
  0.910
BMS_2872
Putative membrane protein.
    
  0.905
BMS_1544
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
  0.789
BMS_0480
Putative membrane protein.
       0.768
BMS_0349
Putative membrane protein.
  
    0.595
BMS_0846
Putative acyltransferase.
  
 
  0.550
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.