Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BMS_0481Putative UDP-glucose 4-epimerase. (319 aa)    
Predicted Functional Partners:
BMS_0482
Putative acyltransferase.
 
    0.947
udg
Putative UDP-glucose dehydrogenase (CPS biosynthesis).
  
 0.922
wbiG
Putative epimerase/dehydratase.
  
  
  0.913
exoB
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.911
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.907
wbpP
UDP-N-acetylglucosamine C4 epimerase.
     
  0.900
BMS_0369
Putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase.
     
  0.900
BMS_0372
Putative epimerase/dehydratase.
     
  0.900
BMS_3136
Putative UDP-glucose-4-epimerase.
     
  0.900
galE
UDP-glucose 4-epimerase.
     
 
0.900
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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