STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_0507Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (292 aa)    
Predicted Functional Partners:
modA
Molybdate-binding periplasmic protein precursor.
 
     0.798
modB
Molybdenum transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    0.797
BMS_0508
Hypothetical protein.
       0.773
BMS_0509
Conserved hypothetical protein.
       0.768
modC
Molybdenum transport ATP-binding protein ModC.
       0.768
BMS_2087
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.766
BMS_2232
Putative LysR-family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.756
BMS_0809
Putative LysR-family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.755
BMS_0893
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.726
BMS_1020
Putative LysR-family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.726
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.