STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_0789Putative phage protein. (59 aa)    
Predicted Functional Partners:
BMS_0790
Putative type I restriction enzyme modification protein.
  
    0.720
BMS_0791
Putative type I restriction enzyme specificity protein.
  
    0.708
BMS_0792
Putative type I restriction enzyme; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.685
BMS_0793
Conserved hypothetical protein.
       0.641
BMS_0795
Conserved hypothetical protein.
       0.630
BMS_0794
Putative membrane protein.
       0.627
BMS_0787
Conserved hypothetical protein.
       0.538
BMS_0788
Putative membrane protein.
       0.538
pin
DNA-invertase.
 
  
 0.406
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.