STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_0821Putative ABC transport, ATP-binding protein. (255 aa)    
Predicted Functional Partners:
hmuU
Transmembrane permease component of haem ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
BMS_0293
Putative iron ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.988
hmuT
Hemin-binding periplasmic protein.
 
 
 0.975
BMS_0291
Putative transport system lipoprotein.
 
 
 0.925
btuF
Putative vitamin B12-binding protein precursor.
 
 
 0.881
BMS_0822
Conserved hypothetical protein.
  
  
 0.864
BMS_0913
Putative ABC transport system, ATP-binding protein.
  
     0.712
BMS_2065
Putative outer membrane protein.
 
  
 0.610
BMS_1351
Putative ABC transport system, ATP-binding protein.
  
  
0.546
BMS_2506
Putative ABC transport system, membrane protein.
  
  
 0.540
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.