Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BMS_0938Putative exported protein. (150 aa)    
Predicted Functional Partners:
ydiU
Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
       0.605
wapA
Putative exported protein.
  
     0.543
BMS_2370
Putative membrane protein.
  
     0.534
BMS_0936
Putative aminopeptidase; Belongs to the peptidase M17 family.
 
     0.529
BMS_1119
Putative membrane protein.
  
     0.496
cpaC
Putative pilus assembly-related protein; Belongs to the bacterial secretin family.
  
     0.478
BMS_2102
Putative D-alanyl-D-alanine carboxypeptidase precursor.
  
     0.474
BMS_1425
Putative exported protein.
  
     0.461
BMS_3431
Conserved hypothetical protein.
  
     0.447
BMS_2999
Hypothetical protein.
  
     0.446
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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