Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BMS_1024Hypothetical protein. (490 aa)    
Predicted Functional Partners:
BMS_2753
Putative two-component response regulator with GGDEF sensory box protein.
 
 
 0.762
BMS_1301
Putative signaling protein.
  
 
 0.737
BMS_1518
Putative histidine kinase/response regulator fusion protein.
 
 
 0.700
BMS_2496
Putative histidine kinase/response regulator fusion protein.
 
 
 0.628
BMS_2169
Hypothetical protein.
  
     0.577
BMS_2390
Two-component sensor kinase.
  
 
 0.552
BMS_1309
Putative two component system histidine kinase/response regulator fusion protein.
   
 
 0.537
BMS_0897
Putative histidine kinase/response regulator fusion protein.
 
 
 0.529
rpmG
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
   
   0.511
BMS_2866
Putative histidine kinase/response regulator fusion protein.
 
 
 0.489
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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