STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_1766Hypothetical protein. (399 aa)    
Predicted Functional Partners:
BMS_1765
Putative metal transport-related, exported protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.934
BMS_1764
Putative cation efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.882
BMS_0699
Putative membrane protein.
  
     0.754
BMS_0805
Putative antibiotic modification-related protein.
  
     0.698
BMS_2404
Putative exported protein.
  
     0.659
BMS_3180
Putative exported protein.
  
     0.651
BMS_3427
Putative exported protein.
  
     0.644
BMS_1855
Conserved hypothetical protein.
  
     0.643
BMS_0021
Putative chaperone SurA precursor (peptidyl-prolyl cis-trans isomerase).
  
     0.635
BMS_1157
Hypothetical protein.
  
    0.613
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.