Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BMS_1920Putative exopolyphosphatase. (340 aa)    
Predicted Functional Partners:
BMS_0198
Putative exopolyphosphatase.
  
  
  0.975
relA
Putative GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.922
BMS_1919
Modification methylase (cytosine-specific DNA methylase); Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
       0.773
BMS_1921
Putative 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase.
       0.773
BMS_1918
Hypothetical protein.
       0.542
BMS_1916
Putative peptidase.
  
    0.488
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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