STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_1958Hypothetical protein. (565 aa)    
Predicted Functional Partners:
BMS_0983
Putative exported carboxypeptidase.
  
     0.626
BMS_1957
Hypothetical protein.
       0.572
BMS_1956
Hypothetical protein.
       0.568
BMS_1955
Hypothetical protein.
       0.553
BMS_1959
Putative lipoprotein.
       0.518
BMS_2373
Putative endonuclease.
  
     0.489
BMS_2471
Putative carboxypeptidase.
  
     0.488
phnC
Putative ABC transport ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
       0.487
BMS_0682
Putative exported endonuclease.
  
     0.479
BMS_0116
Putative membrane protein.
  
    0.469
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.