STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnCPutative ABC transport ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (252 aa)    
Predicted Functional Partners:
BMS_1959
Putative lipoprotein.
 
 
 0.998
BMS_1961
Putative binding-protein-dependent transport system membrane component.
 
 0.993
BMS_0708
Putative ABC transporter ATP-binding protein.
 
    
0.911
BMS_1923
Putative ABC transporter, ATP-binding/permease protein.
 
    
0.905
BMS_1922
Putative ABC transporter, ATP-binding/permease protein.
 
    
0.903
BMS_1678
Putative transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
      0.897
BMS_1357
Putative ABC transporter, ATP-binding protein.
 
    
0.859
dppC
Putative didpeptide permease component of ABC transporter.
 
      0.717
BMS_2675
ABC transporter, ATP-binding protein.
 
     
0.667
phoB
Alkaline phosphatase III precursor; Belongs to the alkaline phosphatase family.
   
  
 0.495
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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