scoA protein (Halobacteriovorax marinus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

scoA

succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. (234 aa)

Predicted Functional Partners:

BMS_1872

0.999

BMS_1982

0.999

fadB

0.954

BMS_1991

0.945

BMS_2765

0.931

BMS_1367

0.925

BMS_1822

0.925

hbdA

0.920

atoD1

0.907

BMS_1450

0.512

Your Current Organism:

Halobacteriovorax marinus

NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMS_1367	BMS_1450	BMS_1367	BMS_1450	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	0.769
BMS_1367	BMS_1822	BMS_1367	BMS_1822	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Putative thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.916
BMS_1367	BMS_1872	BMS_1367	BMS_1872	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Putative 3-oxoadipate CoA-transferase subunit B.	0.941
BMS_1367	BMS_1982	BMS_1367	BMS_1982	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Putative coenzyme A transferase subunit.	0.941
BMS_1367	BMS_1991	BMS_1367	BMS_1991	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Putative hydroxymethylglutaryl-CoA lyase.	0.939
BMS_1367	BMS_2765	BMS_1367	BMS_2765	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.920
BMS_1367	atoD1	BMS_1367	BMS_1871	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acetate CoA-transferase alpha subunit 1.	0.925
BMS_1367	fadB	BMS_1367	BMS_1821	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Fatty acid oxidation complex subunit alpha.	0.999
BMS_1367	hbdA	BMS_1367	BMS_2772	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Putative 3-hydroxybutyryl-CoA dehydrogenase.	0.988
BMS_1367	scoA	BMS_1367	BMS_1983	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.	0.925
BMS_1450	BMS_1367	BMS_1450	BMS_1367	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.769
BMS_1450	BMS_1822	BMS_1450	BMS_1822	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	Putative thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.769
BMS_1450	BMS_1872	BMS_1450	BMS_1872	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	Putative 3-oxoadipate CoA-transferase subunit B.	0.554
BMS_1450	BMS_1982	BMS_1450	BMS_1982	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	Putative coenzyme A transferase subunit.	0.554
BMS_1450	BMS_1991	BMS_1450	BMS_1991	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	Putative hydroxymethylglutaryl-CoA lyase.	0.669
BMS_1450	BMS_2765	BMS_1450	BMS_2765	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.769
BMS_1450	atoD1	BMS_1450	BMS_1871	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	Acetate CoA-transferase alpha subunit 1.	0.512
BMS_1450	fadB	BMS_1450	BMS_1821	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	Fatty acid oxidation complex subunit alpha.	0.975
BMS_1450	hbdA	BMS_1450	BMS_2772	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	Putative 3-hydroxybutyryl-CoA dehydrogenase.	0.712
BMS_1450	scoA	BMS_1450	BMS_1983	Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.	succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.	0.512