Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
accB-2Carboxyltransferase subunit of acetyl-CoA carboxylase. (540 aa)    
Predicted Functional Partners:
accC2
Putative biotin carboxylase 2 (pseudogene); HMMPfam hit to PF00289, Carbamoyl-phosphate synthetase large chain, N-terminal, score 5.7e-41.
 
 0.997
accC
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.986
BMS_3269
Putative biotin carboxylase.
 
 0.985
fadB
Fatty acid oxidation complex subunit alpha.
  
 
 0.973
ivd
isovaleryl-CoA dehydrogenase.
 
 0.973
echA8
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.952
BMS_3396
Putative acyl-CoA dehydrogenase.
 
 
 0.950
BMS_3268
Putative biotin-requiring protein.
 
 0.901
BMS_1991
Putative hydroxymethylglutaryl-CoA lyase.
 
 0.824
BMS_1999
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.753
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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